tfcache-comparison

diff --git a/configure b/configure
index 4815c82..016c2a6 100755
--- a/configure
+++ b/configure
@@ -28,7 +28,7 @@ if [ -z $1 ]; then
 	chmod +x /usr/local/bin/docker-compose
 fi
 
-cd adapters; bash configure & cd ..
-cd approaches; bash configure & cd ..
-cd applications; bash configure & cd ..
+cd adapters; bash configure cd ..
+cd approaches; bash configure cd ..
+cd applications; bash configure cd ..
 wait
\ No newline at end of file

diff --git a/reduce.sh b/reduce.sh
index cd0e5e9..d091366 100644
--- a/reduce.sh
+++ b/reduce.sh
@@ -33,12 +33,12 @@ for version in $versions; do
 		for user in 1 10 50; do
 			for execution in {1..10}; do
 				echo "Reducing $application-$version with $user users and execution $execution"
-				java -jar adapters/RequestsSimulator/target/RequestsSimulator-1.0.jar --throughput=applications/output/$application-$version-${user}user-${execution}execution-requests --reduce=applications/output/requests-handled.csv --prefix=$application,$version,$user,$execution,
+				java $JAVA_OPTS -jar adapters/RequestsSimulator/target/RequestsSimulator-1.0.jar --throughput=applications/output/$application-$version-${user}user-${execution}execution-requests --reduce=applications/output/requests-handled.csv --prefix=$application,$version,$user,$execution,
 				if [[ $host = "localhost" ]]; then
-					java -jar adapters/Cache/target/Cache-1.0.jar applications/output/$application-$version-${user}user-${execution}execution-cache applications/output/hits-distribution.csv $application,$version,$user,$execution,
+					java $JAVA_OPTS -jar adapters/Cache/target/Cache-1.0.jar applications/output/$application-$version-${user}user-${execution}execution-cache applications/output/hits-distribution.csv $application,$version,$user,$execution,
 				else
 					while ! </dev/tcp/$host/5000; do sleep 5; done
-					echo "caching-approaches-comparison java -jar adapters/Cache/target/Cache-1.0.jar applications/output/$application-$version-${user}user-${execution}execution-cache applications/output/hits-distribution.csv $application,$version,$user,$execution," | netcat -w0 $host 5000
+					echo "caching-approaches-comparison java $JAVA_OPTS -jar adapters/Cache/target/Cache-1.0.jar applications/output/$application-$version-${user}user-${execution}execution-cache applications/output/hits-distribution.csv $application,$version,$user,$execution," | netcat -w0 $host 5000
 				fi
 			done
 		done

diff --git a/run.sh b/run.sh
index 9e55207..73b4780 100644
--- a/run.sh
+++ b/run.sh
@@ -20,40 +20,6 @@ if [[ ! -z $1 ]]; then
 	fi
 fi
 
-echo "Checking workloads of the applications $applications"
-if [[ $applications = "*" ]]; then
-	existing_applications=$(echo applications/uncached/*/)
-else
-	existing_applications=$applications
-fi
-for application in $existing_applications; do
-	application=${application%/}
-	for user in 1 10 50; do
-		if [[ ! -f applications/workloads/$application-workload-${user}user.json ]]; then
-			echo "Generating workloads for $applications with $user users"
-			if [[ $host = "localhost" ]]; then
-				export TRACER_ENABLE=false
-				docker-compose -f applications/uncached/$application/docker-compose.yml up -d --build
-			else
-				while ! </dev/tcp/$host/5000; do sleep 5; done
-				echo "caching-approaches-comparison export TRACER_ENABLE=false" | netcat -w0 $host 5000
-				echo "caching-approaches-comparison docker-compose -f applications/uncached/$application/docker-compose.yml up -d --build" | netcat -w0 $host 5000
-			fi
-			while ! curl -s $host:8080 > /dev/null; do sleep 5; done
-			java -jar adapters/RequestsSimulator/target/RequestsSimulator-1.0.jar --profile=applications/workloads/$application.json --time=1500000 --users=$user --log=applications/workloads/$application-workload-${user}user.json --throughput=applications/output/$application-workload-${user}user-requests --host=$host > applications/output/$application-workload-${user}user-simulator.log 2>&1
-			if [[ $host = "localhost" ]]; then
-				docker-compose -f applications/uncached/$application/docker-compose.yml down -v
-			else
-				while ! </dev/tcp/$host/5000; do sleep 5; done
-				echo "caching-approaches-comparison docker-compose -f applications/uncached/$application/docker-compose.yml down -v" | netcat -w0 $host 5000
-				sleep 11
-			fi
-		else
-			echo "Reusing workload for $application with $user users"
-		fi
-	done
-done
-
 echo "Executing workloads in host $host for the applications $applications among the versions $versions"
 for execution in {1..10}; do
 	for user in 1 10 50; do
@@ -67,6 +33,26 @@ for execution in {1..10}; do
 			echo "Running $execution execution with $user users of applications $existing_applications"
 			for application in $existing_applications; do
 				application=${application%/}
+				if [[ ! -f applications/workloads/$application-workload-${user}user.json ]]; then
+					echo "Generating workload for $application with $user users"
+					if [[ $host = "localhost" ]]; then
+						export TRACER_ENABLE=false
+						docker-compose -f applications/uncached/$application/docker-compose.yml up -d --build
+					else
+						while ! </dev/tcp/$host/5000; do sleep 5; done
+						echo "caching-approaches-comparison export TRACER_ENABLE=false" | netcat -w0 $host 5000
+						echo "caching-approaches-comparison docker-compose -f applications/uncached/$application/docker-compose.yml up -d --build" | netcat -w0 $host 5000
+					fi
+					while ! curl -s $host:8080 > /dev/null; do sleep 5; done
+					java $JAVA_OPTS -jar adapters/RequestsSimulator/target/RequestsSimulator-1.0.jar --profile=applications/workloads/$application.json --time=1500000 --users=$user --log=applications/workloads/$application-workload-${user}user.json --throughput=applications/output/$application-workload-${user}user-requests --host=$host > applications/output/$application-workload-${user}user-simulator.log 2>&1
+					if [[ $host = "localhost" ]]; then
+						docker-compose -f applications/uncached/$application/docker-compose.yml down -v
+					else
+						while ! </dev/tcp/$host/5000; do sleep 5; done
+						echo "caching-approaches-comparison docker-compose -f applications/uncached/$application/docker-compose.yml down -v" | netcat -w0 $host 5000
+						sleep 11
+					fi
+				fi
 				echo "Running $application with $user users and execution $execution"
 				if [[ $host = "localhost" ]]; then
 					export CACHE_EVENTS=/caching-approaches-comparison/applications/output/$application-$version-${user}user-${execution}execution-cache
@@ -77,7 +63,7 @@ for execution in {1..10}; do
 					echo "caching-approaches-comparison docker-compose -f applications/cached/$version/$application/docker-compose.yml up -d --build" | netcat -w0 $host 5000
 				fi
 				while ! curl -s $host:8080 > /dev/null; do sleep 5; done
-				java -jar adapters/RequestsSimulator/target/RequestsSimulator-1.0.jar --profile=applications/workloads/$application.json --execute=applications/workloads/$application-workload-${user}user.json --throughput=applications/output/$application-$version-${user}user-${execution}execution-requests --host=$host > applications/output/$application-$version-${user}user-${execution}execution-simulator.log 2>&1
+				java $JAVA_OPTS -jar adapters/RequestsSimulator/target/RequestsSimulator-1.0.jar --profile=applications/workloads/$application.json --execute=applications/workloads/$application-workload-${user}user.json --throughput=applications/output/$application-$version-${user}user-${execution}execution-requests --host=$host > applications/output/$application-$version-${user}user-${execution}execution-simulator.log 2>&1
 				if [[ $host = "localhost" ]]; then
 					docker-compose -f applications/cached/$version/$application/docker-compose.yml down -v
 				else

diff --git a/trace.sh b/trace.sh
index 04a3103..2780d50 100644
--- a/trace.sh
+++ b/trace.sh
@@ -19,6 +19,7 @@ fi
 echo "Running in host $host for the applications: $applications"
 for application in $applications; do
 	application=${application%/}
+	echo "Running application $application"
 	if [[ $host = "localhost" ]]; then
 		export TRACER_ENABLE=true
 		docker-compose -f applications/uncached/$application/docker-compose.yml up -d --build
@@ -28,7 +29,7 @@ for application in $applications; do
 		echo "caching-approaches-comparison docker-compose -f applications/uncached/$application/docker-compose.yml up -d --build" | netcat -w0 $host 5000
 	fi
 	while ! curl -s $host:8080 > /dev/null; do sleep 5; done
-	java -jar adapters/RequestsSimulator/target/RequestsSimulator-1.0.jar --profile=applications/workloads/$application.json --time=600000 --users=1 --log=applications/workloads/$application-execution-uncached.json --throughput=applications/output/$application-uncached-requests --host=$host > applications/output/$application-uncached-simulator.log 2>&1
+	java $JAVA_OPTS -jar adapters/RequestsSimulator/target/RequestsSimulator-1.0.jar --profile=applications/workloads/$application.json --time=600000 --users=1 --log=applications/workloads/$application-execution-uncached.json --throughput=applications/output/$application-uncached-requests --host=$host > applications/output/$application-uncached-simulator.log 2>&1
 	if [[ $host = "localhost" ]]; then
 		docker-compose -f applications/uncached/$application/docker-compose.yml down -v
 	else